Coordinately controlled genes in eukaryotic cells share a set of control elements, Coordinately controlled genes in eukaryotic cells are activated by the same chemical signals. Coordinately controlled genes in eukaryotic cells are located together on the same chromosome.

We show that the influence from the rootstock genotype is highly tissue and time dependent, manifesting only in leaves, primarily during a single year of our three-year study. Further, the degree of rootstock influence on scion gene expression is driven by interactions with the local environment.